J3_9ZDV_001

3D structure

PDB id

9ZDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 51

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGG*CG*UACAGAACAUGGCUUAUAG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZDV|1|A|C|13
9ZDV|1|A|G|14
9ZDV|1|A|G|15
*
9ZDV|1|A|C|344
9ZDV|1|A|G|345
*
9ZDV|1|A|U|384
9ZDV|1|A|A|385
9ZDV|1|A|C|386
9ZDV|1|A|A|387
9ZDV|1|A|G|388
9ZDV|1|A|A|389
9ZDV|1|A|A|390
9ZDV|1|A|C|391
9ZDV|1|A|A|392
9ZDV|1|A|U|393
9ZDV|1|A|G|394
9ZDV|1|A|G|395
9ZDV|1|A|C|396
9ZDV|1|A|U|397
9ZDV|1|A|U|398
9ZDV|1|A|A|399
9ZDV|1|A|U|400
9ZDV|1|A|A|401
9ZDV|1|A|G|402

Current chains

Chain A

RNase P RNA

Nearby chains