J3_9ZDV_003

3D structure

PDB id

9ZDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 51

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCGGGGAAAG*CGAUUACCCUGAAAGUG*UAAACC

Length

33 nucleotides

Bulged bases

9ZDV|1|A|U|179, 9ZDV|1|A|A|240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZDV|1|A|G|140
9ZDV|1|A|C|141
9ZDV|1|A|G|142
9ZDV|1|A|G|143
9ZDV|1|A|G|144
9ZDV|1|A|G|145
9ZDV|1|A|A|146
9ZDV|1|A|A|147
9ZDV|1|A|A|148
9ZDV|1|A|G|149
*
9ZDV|1|A|C|176
9ZDV|1|A|G|177
9ZDV|1|A|A|178
9ZDV|1|A|U|179
9ZDV|1|A|U|180
9ZDV|1|A|A|181
9ZDV|1|A|C|182
9ZDV|1|A|C|183
9ZDV|1|A|C|184
9ZDV|1|A|U|185
9ZDV|1|A|G|186
9ZDV|1|A|A|187
9ZDV|1|A|A|188
9ZDV|1|A|A|189
9ZDV|1|A|G|190
9ZDV|1|A|U|191
9ZDV|1|A|G|192
*
9ZDV|1|A|U|238
9ZDV|1|A|A|239
9ZDV|1|A|A|240
9ZDV|1|A|A|241
9ZDV|1|A|C|242
9ZDV|1|A|C|243

Current chains

Chain A

RNase P RNA

Nearby chains