J3_9ZFD_001

3D structure

PDB id

9ZFD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CGG*CG*UACAGAACAUGGCUUAUAG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZFD|1|A|C|13
9ZFD|1|A|G|14
9ZFD|1|A|G|15
*
9ZFD|1|A|C|344
9ZFD|1|A|G|345
*
9ZFD|1|A|U|384
9ZFD|1|A|A|385
9ZFD|1|A|C|386
9ZFD|1|A|A|387
9ZFD|1|A|G|388
9ZFD|1|A|A|389
9ZFD|1|A|A|390
9ZFD|1|A|C|391
9ZFD|1|A|A|392
9ZFD|1|A|U|393
9ZFD|1|A|G|394
9ZFD|1|A|G|395
9ZFD|1|A|C|396
9ZFD|1|A|U|397
9ZFD|1|A|U|398
9ZFD|1|A|A|399
9ZFD|1|A|U|400
9ZFD|1|A|A|401
9ZFD|1|A|G|402

Current chains

Chain A

RNase P RNA

Nearby chains