J3_9ZGQ_003

3D structure

PDB id

9ZGQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 8

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCG*CCUGAAAG*CC

Length

13 nucleotides

Bulged bases

9ZGQ|1|A|C|141, 9ZGQ|1|A|U|185, 9ZGQ|1|A|G|186, 9ZGQ|1|A|A|187, 9ZGQ|1|A|A|188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGQ|1|A|G|140
9ZGQ|1|A|C|141
9ZGQ|1|A|G|142
*
9ZGQ|1|A|C|183
9ZGQ|1|A|C|184
9ZGQ|1|A|U|185
9ZGQ|1|A|G|186
9ZGQ|1|A|A|187
9ZGQ|1|A|A|188
9ZGQ|1|A|A|189
9ZGQ|1|A|G|190
*
9ZGQ|1|A|C|242
9ZGQ|1|A|C|243

Current chains

Chain A

RNase P RNA

Nearby chains