J3_9ZGY_003

3D structure

PDB id

9ZGY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 16

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGGGGAAAGAACCUACGU*GAUAUGGUUCGAUUACCCUGAAAG*CC

Length

45 nucleotides

Bulged bases

9ZGY|1|A|C|141, 9ZGY|1|A|G|145, 9ZGY|1|A|A|146, 9ZGY|1|A|A|147, 9ZGY|1|A|A|148, 9ZGY|1|A|A|181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZGY|1|A|G|140
9ZGY|1|A|C|141
9ZGY|1|A|G|142
9ZGY|1|A|G|143
9ZGY|1|A|G|144
9ZGY|1|A|G|145
9ZGY|1|A|A|146
9ZGY|1|A|A|147
9ZGY|1|A|A|148
9ZGY|1|A|G|149
9ZGY|1|A|A|150
9ZGY|1|A|A|151
9ZGY|1|A|C|152
9ZGY|1|A|C|153
9ZGY|1|A|U|154
9ZGY|1|A|A|155
9ZGY|1|A|C|156
9ZGY|1|A|G|157
9ZGY|1|A|U|158
*
9ZGY|1|A|G|167
9ZGY|1|A|A|168
9ZGY|1|A|U|169
9ZGY|1|A|A|170
9ZGY|1|A|U|171
9ZGY|1|A|G|172
9ZGY|1|A|G|173
9ZGY|1|A|U|174
9ZGY|1|A|U|175
9ZGY|1|A|C|176
9ZGY|1|A|G|177
9ZGY|1|A|A|178
9ZGY|1|A|U|179
9ZGY|1|A|U|180
9ZGY|1|A|A|181
9ZGY|1|A|C|182
9ZGY|1|A|C|183
9ZGY|1|A|C|184
9ZGY|1|A|U|185
9ZGY|1|A|G|186
9ZGY|1|A|A|187
9ZGY|1|A|A|188
9ZGY|1|A|A|189
9ZGY|1|A|G|190
*
9ZGY|1|A|C|242
9ZGY|1|A|C|243

Current chains

Chain A

RNase P RNA

Nearby chains