J3_9ZH9_003

3D structure

PDB id

9ZH9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 23

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCG*CUGAAAG*CC

Length

12 nucleotides

Bulged bases

9ZH9|1|A|C|141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9ZH9_003 not in the Motif Atlas

Homologous match to J3_1NBS_002

Geometric discrepancy: 0.2121

The information below is about J3_1NBS_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_70464.1

Basepair signature

cWW-cWW-cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9ZH9|1|A|G|140
9ZH9|1|A|C|141
9ZH9|1|A|G|142
*
9ZH9|1|A|C|184
9ZH9|1|A|U|185
9ZH9|1|A|G|186
9ZH9|1|A|A|187
9ZH9|1|A|A|188
9ZH9|1|A|A|189
9ZH9|1|A|G|190
*
9ZH9|1|A|C|242
9ZH9|1|A|C|243

Current chains

Chain A

RNase P RNA

Nearby chains