J3_9ZIF_001

3D structure

PDB id

9ZIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 7

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGG*CG*UACAGAACAUGGCUUAUAG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIF|1|A|C|13
9ZIF|1|A|G|14
9ZIF|1|A|G|15
*
9ZIF|1|A|C|344
9ZIF|1|A|G|345
*
9ZIF|1|A|U|384
9ZIF|1|A|A|385
9ZIF|1|A|C|386
9ZIF|1|A|A|387
9ZIF|1|A|G|388
9ZIF|1|A|A|389
9ZIF|1|A|A|390
9ZIF|1|A|C|391
9ZIF|1|A|A|392
9ZIF|1|A|U|393
9ZIF|1|A|G|394
9ZIF|1|A|G|395
9ZIF|1|A|C|396
9ZIF|1|A|U|397
9ZIF|1|A|U|398
9ZIF|1|A|A|399
9ZIF|1|A|U|400
9ZIF|1|A|A|401
9ZIF|1|A|G|402

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component