J3_9ZIM_001

3D structure

PDB id

9ZIM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 14

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

CGG*CGC*GUACAGAACAUGGCUUAUAG

Length

26 nucleotides

Bulged bases

9ZIM|1|A|A|389, 9ZIM|1|A|A|390

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIM|1|A|C|13
9ZIM|1|A|G|14
9ZIM|1|A|G|15
*
9ZIM|1|A|C|344
9ZIM|1|A|G|345
9ZIM|1|A|C|346
*
9ZIM|1|A|G|383
9ZIM|1|A|U|384
9ZIM|1|A|A|385
9ZIM|1|A|C|386
9ZIM|1|A|A|387
9ZIM|1|A|G|388
9ZIM|1|A|A|389
9ZIM|1|A|A|390
9ZIM|1|A|C|391
9ZIM|1|A|A|392
9ZIM|1|A|U|393
9ZIM|1|A|G|394
9ZIM|1|A|G|395
9ZIM|1|A|C|396
9ZIM|1|A|U|397
9ZIM|1|A|U|398
9ZIM|1|A|A|399
9ZIM|1|A|U|400
9ZIM|1|A|A|401
9ZIM|1|A|G|402

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component