J3_9ZIV_001

3D structure

PDB id

9ZIV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 17

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGG*CG*UACAGAACAUGGCUUAUAG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIV|1|A|C|13
9ZIV|1|A|G|14
9ZIV|1|A|G|15
*
9ZIV|1|A|C|344
9ZIV|1|A|G|345
*
9ZIV|1|A|U|384
9ZIV|1|A|A|385
9ZIV|1|A|C|386
9ZIV|1|A|A|387
9ZIV|1|A|G|388
9ZIV|1|A|A|389
9ZIV|1|A|A|390
9ZIV|1|A|C|391
9ZIV|1|A|A|392
9ZIV|1|A|U|393
9ZIV|1|A|G|394
9ZIV|1|A|G|395
9ZIV|1|A|C|396
9ZIV|1|A|U|397
9ZIV|1|A|U|398
9ZIV|1|A|A|399
9ZIV|1|A|U|400
9ZIV|1|A|A|401
9ZIV|1|A|G|402

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component