3D structure

PDB id
9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAAGUU*AAUGUGC*GAAC
Length
17 nucleotides
Bulged bases
9ZN2|1|a|G|1024, 9ZN2|1|a|U|1025
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ZN2|1|a|G|1003
9ZN2|1|a|A|1004
9ZN2|1|a|A|1005
9ZN2|1|a|G|1006
9ZN2|1|a|U|1007
9ZN2|1|a|U|1008
*
9ZN2|1|a|A|1021
9ZN2|1|a|A|1022
9ZN2|1|a|U|1023
9ZN2|1|a|G|1024
9ZN2|1|a|U|1025
9ZN2|1|a|G|1026
9ZN2|1|a|C|1027
*
9ZN2|1|a|G|1034
9ZN2|1|a|A|1035
9ZN2|1|a|A|1036
9ZN2|1|a|C|1037

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain n
Small ribosomal subunit protein uS14

Coloring options:

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