3D structure

PDB id
9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.91 Å

Loop

Sequence
GUGGAUGC*GCGAAAAGAAC*GAGUGAAAAAGAACCUGAAAC
Length
40 nucleotides
Bulged bases
9ZTL|1|a|A|504, 9ZTL|1|a|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ZTL|1|a|G|24
9ZTL|1|a|U|25
9ZTL|1|a|G|26
9ZTL|1|a|G|27
9ZTL|1|a|A|28
9ZTL|1|a|U|29
9ZTL|1|a|G|30
9ZTL|1|a|C|31
*
9ZTL|1|a|G|474
9ZTL|1|a|C|475
9ZTL|1|a|G|476
9ZTL|1|a|A|477
9ZTL|1|a|A|478
9ZTL|1|a|A|479
9ZTL|1|a|A|480
9ZTL|1|a|G|481
9ZTL|1|a|A|482
9ZTL|1|a|A|483
9ZTL|1|a|C|484
*
9ZTL|1|a|G|496
9ZTL|1|a|A|497
9ZTL|1|a|G|498
9ZTL|1|a|U|499
9ZTL|1|a|G|500
9ZTL|1|a|A|501
9ZTL|1|a|A|502
9ZTL|1|a|A|503
9ZTL|1|a|A|504
9ZTL|1|a|A|505
9ZTL|1|a|G|506
9ZTL|1|a|A|507
9ZTL|1|a|A|508
9ZTL|1|a|C|509
9ZTL|1|a|C|510
9ZTL|1|a|U|511
9ZTL|1|a|G|512
9ZTL|1|a|A|513
9ZTL|1|a|A|514
9ZTL|1|a|A|515
9ZTL|1|a|C|516

Current chains

Chain a
23s rRNA

Nearby chains

Chain Y
apoMyoglobin nascent polypeptide
Chain p
50S ribosomal protein L20
Chain r
Large ribosomal subunit protein uL22
Chain t
50S ribosomal protein L24
Chain z
50S ribosomal protein L32

Coloring options:

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