J4_10QM_009

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

10QM|1|I|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|C|1833
10QM|1|I|U|1834
10QM|1|I|2MG|1835
*
10QM|1|I|C|1905
10QM|1|I|G|1906
*
10QM|1|I|C|1924
10QM|1|I|C|1925
10QM|1|I|U|1926
10QM|1|I|A|1927
10QM|1|I|A|1928
10QM|1|I|G|1929
10QM|1|I|G|1930
10QM|1|I|U|1931
10QM|1|I|A|1932
10QM|1|I|G|1933
*
10QM|1|I|C|1967
10QM|1|I|G|1968
10QM|1|I|A|1969
10QM|1|I|A|1970
10QM|1|I|U|1971
10QM|1|I|G|1972

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L2