J4_11BQ_012

3D structure

PDB id

11BQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

11BQ|1|a|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11BQ|1|a|C|1833
11BQ|1|a|U|1834
11BQ|1|a|2MG|1835
*
11BQ|1|a|C|1905
11BQ|1|a|G|1906
*
11BQ|1|a|C|1924
11BQ|1|a|C|1925
11BQ|1|a|U|1926
11BQ|1|a|A|1927
11BQ|1|a|A|1928
11BQ|1|a|G|1929
11BQ|1|a|G|1930
11BQ|1|a|U|1931
11BQ|1|a|A|1932
11BQ|1|a|G|1933
*
11BQ|1|a|C|1967
11BQ|1|a|G|1968
11BQ|1|a|A|1969
11BQ|1|a|A|1970
11BQ|1|a|U|1971
11BQ|1|a|G|1972

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain c

50S ribosomal protein L2