J4_11EL_008

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

11EL|1|a|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11EL|1|a|G|1310
11EL|1|a|G|1311
11EL|1|a|U|1312
11EL|1|a|U|1313
11EL|1|a|C|1314
*
11EL|1|a|G|1338
11EL|1|a|G|1339
11EL|1|a|U|1340
11EL|1|a|G|1341
11EL|1|a|A|1342
11EL|1|a|G|1343
*
11EL|1|a|C|1404
11EL|1|a|U|1405
*
11EL|1|a|A|1597
11EL|1|a|A|1598
11EL|1|a|U|1599
11EL|1|a|C|1600
11EL|1|a|G|1601
11EL|1|a|U|1602
11EL|1|a|A|1603
11EL|1|a|C|1604

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain s

50S ribosomal protein L23