J4_11EL_012

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

11EL|1|a|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11EL|1|a|C|1833
11EL|1|a|U|1834
11EL|1|a|2MG|1835
*
11EL|1|a|C|1905
11EL|1|a|G|1906
*
11EL|1|a|C|1924
11EL|1|a|C|1925
11EL|1|a|U|1926
11EL|1|a|A|1927
11EL|1|a|A|1928
11EL|1|a|G|1929
11EL|1|a|G|1930
11EL|1|a|U|1931
11EL|1|a|A|1932
11EL|1|a|G|1933
*
11EL|1|a|C|1967
11EL|1|a|G|1968
11EL|1|a|A|1969
11EL|1|a|A|1970
11EL|1|a|U|1971
11EL|1|a|G|1972

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain c

50S ribosomal protein L2