J4_11FV_011

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCAACUG*CACAG*UGAC*GUAAUGAU

Length

24 nucleotides

Bulged bases

11FV|1|I|A|1981

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|G|1770
11FV|1|I|C|1771
11FV|1|I|A|1772
11FV|1|I|A|1773
11FV|1|I|C|1774
11FV|1|I|U|1775
11FV|1|I|G|1776
*
11FV|1|I|C|1788
11FV|1|I|A|1789
11FV|1|I|C|1790
11FV|1|I|A|1791
11FV|1|I|G|1792
*
11FV|1|I|U|1827
11FV|1|I|G|1828
11FV|1|I|A|1829
11FV|1|I|C|1830
*
11FV|1|I|G|1975
11FV|1|I|U|1976
11FV|1|I|A|1977
11FV|1|I|A|1978
11FV|1|I|U|1979
11FV|1|I|G|1980
11FV|1|I|A|1981
11FV|1|I|U|1982

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L2