J4_11FV_012

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

11FV|1|I|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|C|1833
11FV|1|I|U|1834
11FV|1|I|2MG|1835
*
11FV|1|I|C|1905
11FV|1|I|G|1906
*
11FV|1|I|C|1924
11FV|1|I|C|1925
11FV|1|I|U|1926
11FV|1|I|A|1927
11FV|1|I|A|1928
11FV|1|I|G|1929
11FV|1|I|G|1930
11FV|1|I|U|1931
11FV|1|I|A|1932
11FV|1|I|G|1933
*
11FV|1|I|C|1967
11FV|1|I|G|1968
11FV|1|I|A|1969
11FV|1|I|A|1970
11FV|1|I|U|1971
11FV|1|I|G|1972

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain C

Small subunit ribosomal RNA; SSU rRNA

Chain K

50S ribosomal protein L2