J4_11HE_005

3D structure

PDB id

11HE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 60S ribosomal subunit with eEF2 domain IV closed

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

11HE|1|28|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HE|1|28|G|2618
11HE|1|28|G|2619
*
11HE|1|28|U|2637
11HE|1|28|G|2638
11HE|1|28|U|2639
11HE|1|28|G|2640
11HE|1|28|A|2641
11HE|1|28|A|2642
*
11HE|1|28|U|2692
11HE|1|28|G|2693
11HE|1|28|G|2694
11HE|1|28|A|2695
11HE|1|28|A|2696
11HE|1|28|A|2697
11HE|1|28|G|2698
*
11HE|1|28|U|2718
11HE|1|28|C|2719

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 19

60S ribosomal protein L19

Chain 22

Large ribosomal subunit protein eL22

Chain 34

60S ribosomal protein L34

Chain 38

Large ribosomal subunit protein eL38