J4_11HG_006
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GAGGGAG*UGCCGCCG*CACGGGG
- Length
- 24 nucleotides
- Bulged bases
- 11HG|1|28|G|959, 11HG|1|28|C|972, 11HG|1|28|C|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11HG|1|28|C|712
11HG|1|28|C|713
*
11HG|1|28|G|955
11HG|1|28|A|956
11HG|1|28|G|957
11HG|1|28|G|958
11HG|1|28|G|959
11HG|1|28|A|960
11HG|1|28|G|961
*
11HG|1|28|U|971
11HG|1|28|G|971|||A
11HG|1|28|C|972
11HG|1|28|C|973
11HG|1|28|G|974
11HG|1|28|C|975
11HG|1|28|C|976
11HG|1|28|G|977
*
11HG|1|28|C|1278
11HG|1|28|A|1279
11HG|1|28|C|1280
11HG|1|28|G|1281
11HG|1|28|G|1282
11HG|1|28|G|1283
11HG|1|28|G|1284
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 32
- Large ribosomal subunit protein eL32
- Chain L4
- 60S ribosomal protein L4
- Chain L6
- Large ribosomal subunit protein eL6
- Chain L7
- 60S ribosomal protein L7
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