J4_1EXD_001
3D structure
- PDB id
- 1EXD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF A TIGHT-BINDING GLUTAMINE TRNA BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- AUCG*CAC*GAGGUC*GU
- Length
- 15 nucleotides
- Bulged bases
- 1EXD|1|B|U|908, 1EXD|1|B|U|948
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_1EXD_001 not in the Motif Atlas
- Homologous match to J4_5HR6_001
- Geometric discrepancy: 0.2125
- The information below is about J4_5HR6_001
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_95067.1
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 48
Unit IDs
1EXD|1|B|A|907
1EXD|1|B|U|908
1EXD|1|B|C|909
1EXD|1|B|G|910
*
1EXD|1|B|C|925
1EXD|1|B|A|926
1EXD|1|B|C|927
*
1EXD|1|B|G|943
1EXD|1|B|A|944
1EXD|1|B|G|945
1EXD|1|B|G|946
1EXD|1|B|U|948
1EXD|1|B|C|949
*
1EXD|1|B|G|965
1EXD|1|B|U|966
Current chains
- Chain B
- GLUTAMINE TRNA APTAMER
Nearby chains
- Chain A
- GLUTAMINYL-TRNA SYNTHETASE
Coloring options: