J4_1FKA_001
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGCUGGC*GCUUG*CUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCG*CGCGAGCG
- Length
- 75 nucleotides
- Bulged bases
- 1FKA|1|A|U|401, 1FKA|1|A|A|443, 1FKA|1|A|A|455, 1FKA|1|A|A|458, 1FKA|1|A|C|464, 1FKA|1|A|G|469, 1FKA|1|A|G|470, 1FKA|1|A|U|471, 1FKA|1|A|U|479, 1FKA|1|A|A|480, 1FKA|1|A|A|481, 1FKA|1|A|U|482, 1FKA|1|A|A|483, 1FKA|1|A|G|530
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1FKA|1|A|C|35
1FKA|1|A|G|36
1FKA|1|A|C|37
1FKA|1|A|U|38
1FKA|1|A|G|39
1FKA|1|A|G|40
1FKA|1|A|C|41
*
1FKA|1|A|G|398
1FKA|1|A|C|399
1FKA|1|A|U|400
1FKA|1|A|U|401
1FKA|1|A|G|402
*
1FKA|1|A|C|432
1FKA|1|A|U|433
1FKA|1|A|G|434
1FKA|1|A|A|435
1FKA|1|A|A|436
1FKA|1|A|C|437
1FKA|1|A|C|438
1FKA|1|A|C|439
1FKA|1|A|G|440
1FKA|1|A|G|441
1FKA|1|A|G|442
1FKA|1|A|A|443
1FKA|1|A|C|444
1FKA|1|A|G|445
1FKA|1|A|A|446
1FKA|1|A|A|447
1FKA|1|A|A|448
1FKA|1|A|C|449
1FKA|1|A|C|450
1FKA|1|A|C|451
1FKA|1|A|C|452
1FKA|1|A|C|453
1FKA|1|A|G|454
1FKA|1|A|A|455
1FKA|1|A|C|456
1FKA|1|A|G|457
1FKA|1|A|A|458
1FKA|1|A|G|459
1FKA|1|A|G|460
1FKA|1|A|G|461
1FKA|1|A|G|462
1FKA|1|A|A|463
1FKA|1|A|C|464
1FKA|1|A|U|465
1FKA|1|A|G|466
1FKA|1|A|A|467
1FKA|1|A|C|468
1FKA|1|A|G|469
1FKA|1|A|G|470
1FKA|1|A|U|471
1FKA|1|A|A|472
1FKA|1|A|C|473
1FKA|1|A|C|474
1FKA|1|A|G|475
1FKA|1|A|G|476
1FKA|1|A|G|477
1FKA|1|A|G|478
1FKA|1|A|U|479
1FKA|1|A|A|480
1FKA|1|A|A|481
1FKA|1|A|U|482
1FKA|1|A|A|483
1FKA|1|A|G|484
1FKA|1|A|C|485
1FKA|1|A|G|486
*
1FKA|1|A|C|527
1FKA|1|A|G|528
1FKA|1|A|C|529
1FKA|1|A|G|530
1FKA|1|A|A|531
1FKA|1|A|G|532
1FKA|1|A|C|533
1FKA|1|A|G|534
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain D
- 30S RIBOSOMAL PROTEIN S4
- Chain L
- 30S RIBOSOMAL PROTEIN S12
- Chain P
- 30S RIBOSOMAL PROTEIN S16
Coloring options: