J4_1FKA_007
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- AGAG*CAUGUGG*CCAAAG*CGCU
- Length
- 21 nucleotides
- Bulged bases
- 1FKA|1|A|U|177, 1FKA|1|A|G|178, 1FKA|1|A|C|201, 1FKA|1|A|A|202, 1FKA|1|A|A|203, 1FKA|1|A|A|204
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1FKA|1|A|A|136
1FKA|1|A|G|137
1FKA|1|A|A|138
1FKA|1|A|G|139
*
1FKA|1|A|C|173
1FKA|1|A|A|174
1FKA|1|A|U|175
1FKA|1|A|G|176
1FKA|1|A|U|177
1FKA|1|A|G|178
1FKA|1|A|G|179
*
1FKA|1|A|C|200
1FKA|1|A|C|201
1FKA|1|A|A|202
1FKA|1|A|A|203
1FKA|1|A|A|204
1FKA|1|A|G|205
*
1FKA|1|A|C|215
1FKA|1|A|G|216
1FKA|1|A|C|217
1FKA|1|A|U|218
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain T
- 30S RIBOSOMAL PROTEIN S20
Coloring options: