J4_1I97_002

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

AGAG*CAUGUGGA*UCCAAAG*CGCU

Length

23 nucleotides

Bulged bases

1I97|1|A|A|203

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1I97|1|A|A|135
1I97|1|A|G|136
1I97|1|A|A|137
1I97|1|A|G|138
*
1I97|1|A|C|172
1I97|1|A|A|173
1I97|1|A|U|174
1I97|1|A|G|175
1I97|1|A|U|176
1I97|1|A|G|177
1I97|1|A|G|178
1I97|1|A|A|179
*
1I97|1|A|U|198
1I97|1|A|C|199
1I97|1|A|C|200
1I97|1|A|A|201
1I97|1|A|A|202
1I97|1|A|A|203
1I97|1|A|G|204
*
1I97|1|A|C|214
1I97|1|A|G|215
1I97|1|A|C|216
1I97|1|A|U|217

Current chains

Chain A

16S RRNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20