J4_1I97_003

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CGUAAAGGG*CGAAAG*CCCUAAACGAUG*CCG

Length

30 nucleotides

Bulged bases

1I97|1|A|A|555, 1I97|1|A|G|559, 1I97|1|A|A|798, 1I97|1|A|C|800, 1I97|1|A|A|802

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1I97|1|A|C|552
1I97|1|A|G|553
1I97|1|A|U|554
1I97|1|A|A|555
1I97|1|A|A|556
1I97|1|A|A|557
1I97|1|A|G|558
1I97|1|A|G|559
1I97|1|A|G|560
*
1I97|1|A|C|747
1I97|1|A|G|748
1I97|1|A|A|749
1I97|1|A|A|750
1I97|1|A|A|751
1I97|1|A|G|752
*
1I97|1|A|C|793
1I97|1|A|C|794
1I97|1|A|C|795
1I97|1|A|U|796
1I97|1|A|A|797
1I97|1|A|A|798
1I97|1|A|A|799
1I97|1|A|C|800
1I97|1|A|G|801
1I97|1|A|A|802
1I97|1|A|U|803
1I97|1|A|G|804
*
1I97|1|A|C|856
1I97|1|A|C|857
1I97|1|A|G|858

Current chains

Chain A

16S RRNA

Nearby chains

Chain H

30S RIBOSOMAL PROTEIN S8

Chain L

30S RIBOSOMAL PROTEIN S12

Chain O

30S RIBOSOMAL PROTEIN S15

Chain Q

30S RIBOSOMAL PROTEIN S17