J4_1I97_006
3D structure
- PDB id
- 1I97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.5 Å
Loop
- Sequence
- GGUGGA*UACAAUG*CCCAGUUCGGAUU*AUGAAGCCGGAAUC
- Length
- 40 nucleotides
- Bulged bases
- 1I97|1|A|U|1221, 1I97|1|A|U|1283
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1I97|1|A|G|918
1I97|1|A|G|919
1I97|1|A|U|920
1I97|1|A|G|921
1I97|1|A|G|922
1I97|1|A|A|923
*
1I97|1|A|U|1216
1I97|1|A|A|1217
1I97|1|A|C|1218
1I97|1|A|A|1219
1I97|1|A|A|1220
1I97|1|A|U|1221
1I97|1|A|G|1222
*
1I97|1|A|C|1277
1I97|1|A|C|1278
1I97|1|A|C|1279
1I97|1|A|A|1280
1I97|1|A|G|1281
1I97|1|A|U|1282
1I97|1|A|U|1283
1I97|1|A|C|1284
1I97|1|A|G|1285
1I97|1|A|G|1286
1I97|1|A|A|1287
1I97|1|A|U|1288
1I97|1|A|U|1289
*
1I97|1|A|A|1310
1I97|1|A|U|1311
1I97|1|A|G|1312
1I97|1|A|A|1313
1I97|1|A|A|1314
1I97|1|A|G|1315
1I97|1|A|C|1316
1I97|1|A|C|1317
1I97|1|A|G|1318
1I97|1|A|G|1319
1I97|1|A|A|1320
1I97|1|A|A|1321
1I97|1|A|U|1322
1I97|1|A|C|1323
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain G
- 30S RIBOSOMAL PROTEIN S7
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain M
- 30S RIBOSOMAL PROTEIN S13
- Chain U
- 30S RIBOSOMAL PROTEIN THX
Coloring options: