J4_1JZX_003

3D structure

PDB id

1JZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AUG*UUGGUACGCUCAAGGGCGA*UCACAUGCCUCAGACGUAUCGGGAG*CGAAGU

Length

53 nucleotides

Bulged bases

1JZX|1|A|U|1459, 1JZX|1|A|C|1489, 1JZX|1|A|A|1525

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZX|1|A|A|1458
1JZX|1|A|U|1459
1JZX|1|A|G|1460
*
1JZX|1|A|U|1481
1JZX|1|A|U|1482
1JZX|1|A|G|1483
1JZX|1|A|G|1484
1JZX|1|A|U|1485
1JZX|1|A|A|1486
1JZX|1|A|C|1487
1JZX|1|A|G|1488
1JZX|1|A|C|1489
1JZX|1|A|U|1490
1JZX|1|A|C|1491
1JZX|1|A|A|1492
1JZX|1|A|A|1493
1JZX|1|A|G|1494
1JZX|1|A|G|1495
1JZX|1|A|G|1496
1JZX|1|A|C|1497
1JZX|1|A|G|1498
1JZX|1|A|A|1499
*
1JZX|1|A|U|1521
1JZX|1|A|C|1522
1JZX|1|A|A|1523
1JZX|1|A|C|1524
1JZX|1|A|A|1525
1JZX|1|A|U|1526
1JZX|1|A|G|1527
1JZX|1|A|C|1528
1JZX|1|A|C|1529
1JZX|1|A|U|1530
1JZX|1|A|C|1531
1JZX|1|A|A|1532
1JZX|1|A|G|1533
1JZX|1|A|A|1534
1JZX|1|A|C|1535
1JZX|1|A|G|1536
1JZX|1|A|U|1537
1JZX|1|A|A|1538
1JZX|1|A|U|1539
1JZX|1|A|C|1540
1JZX|1|A|G|1541
1JZX|1|A|G|1542
1JZX|1|A|G|1543
1JZX|1|A|A|1544
1JZX|1|A|G|1545
*
1JZX|1|A|C|1558
1JZX|1|A|G|1559
1JZX|1|A|A|1560
1JZX|1|A|A|1561
1JZX|1|A|G|1562
1JZX|1|A|U|1563

Current chains

Chain A

23S rRNA

Nearby chains