J4_1VW3_004

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUU*AAAA*UAUA*UGUAUACCGUAAU

Length

25 nucleotides

Bulged bases

1VW3|1|A|U|1342, 1VW3|1|A|A|1352, 1VW3|1|A|U|1412, 1VW3|1|A|A|1548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VW3|1|A|G|1340
1VW3|1|A|G|1341
1VW3|1|A|U|1342
1VW3|1|A|U|1343
*
1VW3|1|A|A|1351
1VW3|1|A|A|1352
1VW3|1|A|A|1353
1VW3|1|A|A|1354
*
1VW3|1|A|U|1410
1VW3|1|A|A|1411
1VW3|1|A|U|1412
1VW3|1|A|A|1413
*
1VW3|1|A|U|1545
1VW3|1|A|G|1546
1VW3|1|A|U|1547
1VW3|1|A|A|1548
1VW3|1|A|U|1549
1VW3|1|A|A|1550
1VW3|1|A|C|1551
1VW3|1|A|C|1552
1VW3|1|A|G|1553
1VW3|1|A|U|1554
1VW3|1|A|A|1555
1VW3|1|A|A|1556
1VW3|1|A|U|1557

Current chains

Chain A

21S ribosomal RNA

Nearby chains