J4_1VW3_005

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AACUG*CACCG*UGAACU*ACGUAAU

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VW3|1|A|A|1679
1VW3|1|A|A|1680
1VW3|1|A|C|1681
1VW3|1|A|U|1682
1VW3|1|A|G|1683
*
1VW3|1|A|C|1695
1VW3|1|A|A|1696
1VW3|1|A|C|1697
1VW3|1|A|C|1698
1VW3|1|A|G|1699
*
1VW3|1|A|U|1735
1VW3|1|A|G|1736
1VW3|1|A|A|1737
1VW3|1|A|A|1738
1VW3|1|A|C|1739
1VW3|1|A|U|1740
*
1VW3|1|A|A|1873
1VW3|1|A|C|1874
1VW3|1|A|G|1875
1VW3|1|A|U|1876
1VW3|1|A|A|1877
1VW3|1|A|A|1878
1VW3|1|A|U|1879

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial