J4_1VW3_006

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUG*CA*UAUAAUGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

1VW3|1|A|U|1871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VW3|1|A|C|1741
1VW3|1|A|U|1742
1VW3|1|A|G|1743
*
1VW3|1|A|C|1806
1VW3|1|A|A|1807
*
1VW3|1|A|U|1824
1VW3|1|A|A|1825
1VW3|1|A|U|1826
1VW3|1|A|A|1827
1VW3|1|A|A|1828
1VW3|1|A|U|1829
1VW3|1|A|G|1830
1VW3|1|A|U|1831
1VW3|1|A|A|1832
1VW3|1|A|G|1833
*
1VW3|1|A|U|1867
1VW3|1|A|G|1868
1VW3|1|A|A|1869
1VW3|1|A|A|1870
1VW3|1|A|U|1871
1VW3|1|A|G|1872

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial