J4_1VW3_007

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAAAA*UA*UAAAUUAA*UAUAAC

Length

22 nucleotides

Bulged bases

1VW3|1|A|U|2600, 1VW3|1|A|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VW3|1|A|G|2445
1VW3|1|A|U|2446
1VW3|1|A|A|2447
1VW3|1|A|A|2448
1VW3|1|A|A|2449
1VW3|1|A|A|2450
*
1VW3|1|A|U|2466
1VW3|1|A|A|2467
*
1VW3|1|A|U|2582
1VW3|1|A|A|2583
1VW3|1|A|A|2584
1VW3|1|A|A|2585
1VW3|1|A|U|2586
1VW3|1|A|U|2587
1VW3|1|A|A|2588
1VW3|1|A|A|2589
*
1VW3|1|A|U|2598
1VW3|1|A|A|2599
1VW3|1|A|U|2600
1VW3|1|A|A|2601
1VW3|1|A|A|2602
1VW3|1|A|C|2603

Current chains

Chain A

21S ribosomal RNA

Nearby chains