J4_22TU_005

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

22TU|1|L5|G|1271, 22TU|1|L5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|C|981
22TU|1|L5|U|982
22TU|1|L5|C|983
*
22TU|1|L5|G|1070
22TU|1|L5|C|1071
22TU|1|L5|C|1072
*
22TU|1|L5|G|1240
22TU|1|L5|C|1241
22TU|1|L5|G|1242
22TU|1|L5|C|1243
*
22TU|1|L5|G|1268
22TU|1|L5|G|1269
22TU|1|L5|A|1270
22TU|1|L5|G|1271
22TU|1|L5|C|1272
22TU|1|L5|G|1273

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein L7

Chain Lb

60S ribosomal protein L29