J4_22TU_009

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

22TU|1|L5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|G|2618
22TU|1|L5|G|2619
*
22TU|1|L5|U|2637
22TU|1|L5|G|2638
22TU|1|L5|U|2639
22TU|1|L5|G|2640
22TU|1|L5|A|2641
22TU|1|L5|A|2642
*
22TU|1|L5|U|2692
22TU|1|L5|G|2693
22TU|1|L5|G|2694
22TU|1|L5|A|2695
22TU|1|L5|A|2696
22TU|1|L5|A|2697
22TU|1|L5|G|2698
*
22TU|1|L5|U|2718
22TU|1|L5|C|2719

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

60S ribosomal protein L22

Chain Lg

60S ribosomal protein L34

Chain Lk

60S ribosomal protein L38