Loop J4_2F4V

3D structure

PDB id: 2F4V (explore in PDB, NAKB, or RNA 3D Hub)
Description: 30S ribosome + designer antibiotic
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å

Loop

Sequence: GGCCUUGACAUGCUAGGGAACCCG*UGGGGUGCCC*GGAGCCCUAGCACAGG*CCUUACGGCC
Length: 60 nucleotides
Bulged bases: None detected
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

2F4V|1|A|G|987
2F4V|1|A|G|988
2F4V|1|A|C|989
2F4V|1|A|C|990
2F4V|1|A|U|991
2F4V|1|A|U|992
2F4V|1|A|G|993
2F4V|1|A|A|994
2F4V|1|A|C|995
2F4V|1|A|A|996
2F4V|1|A|U|997
2F4V|1|A|G|998
2F4V|1|A|C|999
2F4V|1|A|U|1000
2F4V|1|A|A|1001
2F4V|1|A|G|1002
2F4V|1|A|G|1003
2F4V|1|A|G|1003|||A
2F4V|1|A|A|1004
2F4V|1|A|A|1005
2F4V|1|A|C|1006
2F4V|1|A|C|1007
2F4V|1|A|C|1008
2F4V|1|A|G|1009
*
2F4V|1|A|U|1020
2F4V|1|A|G|1021
2F4V|1|A|G|1022
2F4V|1|A|G|1023
2F4V|1|A|G|1024
2F4V|1|A|U|1025
2F4V|1|A|G|1026
2F4V|1|A|C|1027
2F4V|1|A|C|1028
2F4V|1|A|C|1029
*
2F4V|1|A|G|1033
2F4V|1|A|G|1034
2F4V|1|A|A|1035
2F4V|1|A|G|1036
2F4V|1|A|C|1037
2F4V|1|A|C|1038
2F4V|1|A|C|1039
2F4V|1|A|U|1040
2F4V|1|A|A|1041
2F4V|1|A|G|1042
2F4V|1|A|C|1043
2F4V|1|A|A|1044
2F4V|1|A|C|1045
2F4V|1|A|A|1046
2F4V|1|A|G|1047
2F4V|1|A|G|1048
*
2F4V|1|A|C|1209
2F4V|1|A|C|1210
2F4V|1|A|U|1211
2F4V|1|A|U|1212
2F4V|1|A|A|1213
2F4V|1|A|C|1214
2F4V|1|A|G|1215
2F4V|1|A|G|1216
2F4V|1|A|C|1217
2F4V|1|A|C|1218

Current chains

Chain A: 16S ribosomal RNA

Nearby chains

Chain C: 30S ribosomal protein S3
Chain N: 30S ribosomal protein S14
Chain S: 30S ribosomal protein S19

J4_2F4V_004