J4_2HHH_003
3D structure
- PDB id
- 2HHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of kasugamycin bound to the 30S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- CGUAAAGGG*CGAAAG*CCCUAAACGAUG*CCG
- Length
- 30 nucleotides
- Bulged bases
- 2HHH|1|A|A|556, 2HHH|1|A|G|560, 2HHH|1|A|A|799
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2HHH|1|A|C|553
2HHH|1|A|G|554
2HHH|1|A|U|555
2HHH|1|A|A|556
2HHH|1|A|A|557
2HHH|1|A|A|558
2HHH|1|A|G|559
2HHH|1|A|G|560
2HHH|1|A|G|561
*
2HHH|1|A|C|748
2HHH|1|A|G|749
2HHH|1|A|A|750
2HHH|1|A|A|751
2HHH|1|A|A|752
2HHH|1|A|G|753
*
2HHH|1|A|C|794
2HHH|1|A|C|795
2HHH|1|A|C|796
2HHH|1|A|U|797
2HHH|1|A|A|798
2HHH|1|A|A|799
2HHH|1|A|A|800
2HHH|1|A|C|801
2HHH|1|A|G|802
2HHH|1|A|A|803
2HHH|1|A|U|804
2HHH|1|A|G|805
*
2HHH|1|A|C|857
2HHH|1|A|C|858
2HHH|1|A|G|859
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S5
- Chain H
- 30S ribosomal protein S8
- Chain L
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S17
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