J4_2OEU_001
3D structure
- PDB id
- 2OEU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Full-length hammerhead ribozyme with Mn(II) bound
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2 Å
Loop
- Sequence
- GC*GAG*CGAAA*U(OMC)C
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_97085.2
- Basepair signature
- cWW-cWW-F-cWW-tHS-cWW-F-F
- Number of instances in this motif group
- 3
Unit IDs
2OEU|1|A|G|14
2OEU|1|A|C|15
*
2OEU|1|A|G|20
2OEU|1|A|A|21
2OEU|1|A|G|22
*
2OEU|1|A|C|35
2OEU|1|A|G|36
2OEU|1|A|A|37
2OEU|1|A|A|38
2OEU|1|A|A|39
*
2OEU|1|B|U|5
2OEU|1|B|OMC|6
2OEU|1|B|C|7
Current chains
- Chain A
- Hammerhead Ribozyme
- Chain B
- 5'-R(*GP*GP*CP*GP*UP*(OMC)P*CP*UP*GP*GP*(5BU)P*AP*UP*CP*CP*AP*AP*UP*CP*(DC))-3'
Nearby chains
No other chains within 10ÅColoring options: