J4_30QZ_010

3D structure

PDB id

30QZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

30QZ|1|a|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30QZ|1|a|C|1833
30QZ|1|a|U|1834
30QZ|1|a|2MG|1835
*
30QZ|1|a|C|1905
30QZ|1|a|G|1906
*
30QZ|1|a|C|1924
30QZ|1|a|C|1925
30QZ|1|a|U|1926
30QZ|1|a|A|1927
30QZ|1|a|A|1928
30QZ|1|a|G|1929
30QZ|1|a|G|1930
30QZ|1|a|U|1931
30QZ|1|a|A|1932
30QZ|1|a|G|1933
*
30QZ|1|a|C|1967
30QZ|1|a|G|1968
30QZ|1|a|A|1969
30QZ|1|a|A|1970
30QZ|1|a|U|1971
30QZ|1|a|G|1972

Current chains

Chain a

23S rRNA

Nearby chains

Chain V

Heat shock protein 15

Chain Z

Transfer RNA; tRNA

Chain c

Large ribosomal subunit protein uL2