J4_30RB_001

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GAGUAAUGU*AUG*CUAG*CC

Length

18 nucleotides

Bulged bases

30RB|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|A|G|115
30RB|1|A|A|116
30RB|1|A|G|117
30RB|1|A|U|118
30RB|1|A|A|119
30RB|1|A|A|120
30RB|1|A|U|121
30RB|1|A|G|122
30RB|1|A|U|123
*
30RB|1|A|A|238
30RB|1|A|U|239
30RB|1|A|G|240
*
30RB|1|A|C|286
30RB|1|A|U|287
30RB|1|A|A|288
30RB|1|A|G|289
*
30RB|1|A|C|311
30RB|1|A|C|312

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17