J4_3AL0_001

3D structure

PDB id

3AL0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the glutamine transamidosome from Thermotoga maritima in the glutamylation state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.37 Å

Loop

Sequence

GUCG*CG*UGGUG*CC

Length

13 nucleotides

Bulged bases

3AL0|1|E|U|8, 3AL0|1|E|U|48

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tRNA junction

Broad Annotation

No text annotation

Motif group

J4_72305.5

Basepair signature

cWW-F-cWW-cWW-cHS-F-cWW

Number of instances in this motif group

6

Unit IDs

3AL0|1|E|G|7
3AL0|1|E|U|8
3AL0|1|E|C|9
3AL0|1|E|G|10
*
3AL0|1|E|C|25
3AL0|1|E|G|26
*
3AL0|1|E|U|44
3AL0|1|E|G|45
3AL0|1|E|G|46
3AL0|1|E|U|48
3AL0|1|E|G|49
*
3AL0|1|E|C|65
3AL0|1|E|C|66

Current chains

Chain E

tRNAGln

Nearby chains

Chain B

Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

Chain C

Glutamyl-tRNA(Gln) amidotransferase subunit C,Linker,Glutamate--tRNA ligase 2