J4_3CC4_006
3D structure
- PDB id
- 3CC4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CG*UC*GG*CG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_3CC4_006 not in the Motif Atlas
- Homologous match to J4_4V9F_006
- Geometric discrepancy: 0.0946
- The information below is about J4_4V9F_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_24280.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
3CC4|1|0|C|1551
3CC4|1|0|G|1552
*
3CC4|1|0|U|1569
3CC4|1|0|C|1570
*
3CC4|1|0|G|1627
3CC4|1|0|G|1628
*
3CC4|1|0|C|1633
3CC4|1|0|G|1634
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain P
- 50S ribosomal protein L19e
Coloring options: