3D structure

PDB id
3CC4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
CG*UC*GG*CG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_3CC4_006 not in the Motif Atlas
Homologous match to J4_4V9F_006
Geometric discrepancy: 0.0946
The information below is about J4_4V9F_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_24280.2
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
5

Unit IDs

3CC4|1|0|C|1551
3CC4|1|0|G|1552
*
3CC4|1|0|U|1569
3CC4|1|0|C|1570
*
3CC4|1|0|G|1627
3CC4|1|0|G|1628
*
3CC4|1|0|C|1633
3CC4|1|0|G|1634

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain P
50S ribosomal protein L19e

Coloring options:


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