J4_3CC7_002

3D structure

PDB id

3CC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

ACGAAG*CGUG*CAG*CGUACU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3CC7_002 not in the Motif Atlas

Homologous match to J4_4V9F_002

Geometric discrepancy: 0.0369

The information below is about J4_4V9F_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_11418.1

Basepair signature

cWW-F-F-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

1

Unit IDs

3CC7|1|0|A|302
3CC7|1|0|C|303
3CC7|1|0|G|304
3CC7|1|0|A|305
3CC7|1|0|A|306
3CC7|1|0|G|307
*
3CC7|1|0|C|323
3CC7|1|0|G|324
3CC7|1|0|U|325
3CC7|1|0|G|326
*
3CC7|1|0|C|330
3CC7|1|0|A|331
3CC7|1|0|G|332
*
3CC7|1|0|C|344
3CC7|1|0|G|345
3CC7|1|0|U|346
3CC7|1|0|A|347
3CC7|1|0|C|348
3CC7|1|0|U|349

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain T

50S ribosomal protein L24P