J4_3CCE_002

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

ACGAAG*CGUG*CAG*CGUACU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3CCE_002 not in the Motif Atlas

Homologous match to J4_4V9F_002

Geometric discrepancy: 0.0393

The information below is about J4_4V9F_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_11418.1

Basepair signature

cWW-F-F-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

1

Unit IDs

3CCE|1|0|A|302
3CCE|1|0|C|303
3CCE|1|0|G|304
3CCE|1|0|A|305
3CCE|1|0|A|306
3CCE|1|0|G|307
*
3CCE|1|0|C|323
3CCE|1|0|G|324
3CCE|1|0|U|325
3CCE|1|0|G|326
*
3CCE|1|0|C|330
3CCE|1|0|A|331
3CCE|1|0|G|332
*
3CCE|1|0|C|344
3CCE|1|0|G|345
3CCE|1|0|U|346
3CCE|1|0|A|347
3CCE|1|0|C|348
3CCE|1|0|U|349

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain T

50S ribosomal protein L24P