J4_3CCV_002

3D structure

PDB id

3CCV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

ACGAAG*CGUG*CAG*CGUACU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3CCV_002 not in the Motif Atlas

Homologous match to J4_4V9F_002

Geometric discrepancy: 0.0367

The information below is about J4_4V9F_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_11418.1

Basepair signature

cWW-F-F-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

1

Unit IDs

3CCV|1|0|A|302
3CCV|1|0|C|303
3CCV|1|0|G|304
3CCV|1|0|A|305
3CCV|1|0|A|306
3CCV|1|0|G|307
*
3CCV|1|0|C|323
3CCV|1|0|G|324
3CCV|1|0|U|325
3CCV|1|0|G|326
*
3CCV|1|0|C|330
3CCV|1|0|A|331
3CCV|1|0|G|332
*
3CCV|1|0|C|344
3CCV|1|0|G|345
3CCV|1|0|U|346
3CCV|1|0|A|347
3CCV|1|0|C|348
3CCV|1|0|U|349

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain T

50S ribosomal protein L24P