J4_3DH3_001
3D structure
- PDB id
- 3DH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of RluF in complex with a 22 nucleotide RNA substrate
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAACG*CAG(FHU)UC*GAACG*CAG(FHU)UC
- Length
- 22 nucleotides
- Bulged bases
- 3DH3|1|E|FHU|2604, 3DH3|1|F|FHU|2604
- QA status
- Modified nucleotides: FHU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3DH3|1|E|G|2588
3DH3|1|E|A|2589
3DH3|1|E|A|2590
3DH3|1|E|C|2591
3DH3|1|E|G|2592
*
3DH3|1|E|C|2601
3DH3|1|E|A|2602
3DH3|1|E|G|2603
3DH3|1|E|FHU|2604
3DH3|1|E|U|2605
3DH3|1|E|C|2606
*
3DH3|1|F|G|2588
3DH3|1|F|A|2589
3DH3|1|F|A|2590
3DH3|1|F|C|2591
3DH3|1|F|G|2592
*
3DH3|1|F|C|2601
3DH3|1|F|A|2602
3DH3|1|F|G|2603
3DH3|1|F|FHU|2604
3DH3|1|F|U|2605
3DH3|1|F|C|2606
Current chains
- Chain E
- stem loop fragment of E. Coli 23S RNA
- Chain F
- stem loop fragment of E. Coli 23S RNA
Nearby chains
- Chain A
- Ribosomal large subunit pseudouridine synthase F
- Chain B
- Ribosomal large subunit pseudouridine synthase F
Coloring options: