J4_3J6B_002

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUCCUAAU*AA*UAU*AAUA

Length

17 nucleotides

Bulged bases

3J6B|1|A|U|1170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|U|930
3J6B|1|A|U|931
3J6B|1|A|C|932
3J6B|1|A|C|933
3J6B|1|A|U|934
3J6B|1|A|A|935
3J6B|1|A|A|936
3J6B|1|A|U|937
*
3J6B|1|A|A|1126
3J6B|1|A|A|1127
*
3J6B|1|A|U|1142
3J6B|1|A|A|1143
3J6B|1|A|U|1144
*
3J6B|1|A|A|1168
3J6B|1|A|A|1169
3J6B|1|A|U|1170
3J6B|1|A|A|1171

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain H

54S ribosomal protein L23, mitochondrial

Chain a

54S ribosomal protein L20, mitochondrial

Chain c

54S ribosomal protein L31, mitochondrial