J4_3J6B_005

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AACUG*CACCG*UGAACU*ACGUAAU

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|A|1679
3J6B|1|A|A|1680
3J6B|1|A|C|1681
3J6B|1|A|U|1682
3J6B|1|A|G|1683
*
3J6B|1|A|C|1695
3J6B|1|A|A|1696
3J6B|1|A|C|1697
3J6B|1|A|C|1698
3J6B|1|A|G|1699
*
3J6B|1|A|U|1735
3J6B|1|A|G|1736
3J6B|1|A|A|1737
3J6B|1|A|A|1738
3J6B|1|A|C|1739
3J6B|1|A|U|1740
*
3J6B|1|A|A|1873
3J6B|1|A|C|1874
3J6B|1|A|G|1875
3J6B|1|A|U|1876
3J6B|1|A|A|1877
3J6B|1|A|A|1878
3J6B|1|A|U|1879

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial