J4_3J6B_008

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUCU*AA*UAAUA*UGUU

Length

15 nucleotides

Bulged bases

3J6B|1|A|A|3069

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|A|2910
3J6B|1|A|U|2911
3J6B|1|A|C|2912
3J6B|1|A|U|2913
*
3J6B|1|A|A|2941
3J6B|1|A|A|2942
*
3J6B|1|A|U|3068
3J6B|1|A|A|3069
3J6B|1|A|A|3070
3J6B|1|A|U|3071
3J6B|1|A|A|3072
*
3J6B|1|A|U|3105
3J6B|1|A|G|3106
3J6B|1|A|U|3107
3J6B|1|A|U|3108

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial

Chain H

54S ribosomal protein L23, mitochondrial

Chain I

54S ribosomal protein L38, mitochondrial