J4_3J71_001
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UCUCC*GGCCGGGCCAC*GAGGGGCCACGCGCGCGUC*GACGGCGGAGCGA
- Length
- 48 nucleotides
- Bulged bases
- 3J71|1|5|C|1237, 3J71|1|5|G|1273
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|U|980
3J71|1|5|C|981
3J71|1|5|U|982
3J71|1|5|C|983
3J71|1|5|C|984
*
3J71|1|5|G|1069
3J71|1|5|G|1070
3J71|1|5|C|1071
3J71|1|5|C|1072
3J71|1|5|G|1073
3J71|1|5|G|1074
3J71|1|5|G|1075
3J71|1|5|C|1076
3J71|1|5|C|1077
3J71|1|5|A|1078
3J71|1|5|C|1079
*
3J71|1|5|G|1221
3J71|1|5|A|1222
3J71|1|5|G|1232
3J71|1|5|G|1233
3J71|1|5|G|1234
3J71|1|5|G|1235
3J71|1|5|C|1236
3J71|1|5|C|1237
3J71|1|5|A|1238
3J71|1|5|C|1239
3J71|1|5|G|1240
3J71|1|5|C|1241
3J71|1|5|G|1242
3J71|1|5|C|1243
3J71|1|5|G|1244
3J71|1|5|C|1245
3J71|1|5|G|1246
3J71|1|5|U|1247
3J71|1|5|C|1248
*
3J71|1|5|G|1262
3J71|1|5|A|1263
3J71|1|5|C|1264
3J71|1|5|G|1265
3J71|1|5|G|1266
3J71|1|5|C|1267
3J71|1|5|G|1268
3J71|1|5|G|1269
3J71|1|5|A|1270
3J71|1|5|G|1271
3J71|1|5|C|1272
3J71|1|5|G|1273
3J71|1|5|A|1274
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein uL4
- Chain E
- Ribosomal protein eL6
- Chain F
- Ribosomal protein uL30
Coloring options: