J4_3JAG_008

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

3JAG|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|G|2618
3JAG|1|5|G|2619
*
3JAG|1|5|U|2637
3JAG|1|5|G|2638
3JAG|1|5|U|2639
3JAG|1|5|G|2640
3JAG|1|5|A|2641
3JAG|1|5|A|2642
*
3JAG|1|5|U|2692
3JAG|1|5|G|2693
3JAG|1|5|G|2694
3JAG|1|5|A|2695
3JAG|1|5|A|2696
3JAG|1|5|A|2697
3JAG|1|5|G|2698
*
3JAG|1|5|U|2718
3JAG|1|5|C|2719

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

eL19

Chain U

eL22

Chain g

eL34

Chain k

eL38