J4_3JAG_011

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

3JAG|1|5|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|C|4231
3JAG|1|5|U|4232
3JAG|1|5|A|4233
3JAG|1|5|A|4234
3JAG|1|5|G|4235
*
3JAG|1|5|U|4289
3JAG|1|5|U|4290
3JAG|1|5|G|4291
*
3JAG|1|5|C|4318
3JAG|1|5|C|4319
*
3JAG|1|5|G|4328
3JAG|1|5|G|4329
3JAG|1|5|G|4330

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain D

uL18

Chain T

eL21

Chain o

eL42