3D structure

PDB id
3JAH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.45 Å

Loop

Sequence
CUG*CGG*UCUUAAGGUAG*UGAAUG
Length
23 nucleotides
Bulged bases
3JAH|1|5|U|3818
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAH|1|5|C|3696
3JAH|1|5|U|3697
3JAH|1|5|G|3698
*
3JAH|1|5|C|3752
3JAH|1|5|G|3753
3JAH|1|5|G|3754
*
3JAH|1|5|U|3770
3JAH|1|5|C|3771
3JAH|1|5|U|3772
3JAH|1|5|U|3773
3JAH|1|5|A|3774
3JAH|1|5|A|3775
3JAH|1|5|G|3776
3JAH|1|5|G|3777
3JAH|1|5|U|3778
3JAH|1|5|A|3779
3JAH|1|5|G|3780
*
3JAH|1|5|U|3814
3JAH|1|5|G|3815
3JAH|1|5|A|3816
3JAH|1|5|A|3817
3JAH|1|5|U|3818
3JAH|1|5|G|3819

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain 2
Transfer RNA; tRNA
Chain 9
Small subunit ribosomal RNA; SSU rRNA
Chain A
uL2
Chain n
eL41

Coloring options:

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